SCIP259 SCIP Report

Summary

SCIP259 SCIP Report

Predicted fetal genotype for the S allele: Heterozygous

SCIP259 SCIP Report

Predicted fetal genotype for the C allele: Homozygous Wild Type

SCIP259 SCIP Report

Report for the S allele

Summary Statistics

Mean Paternal Fraction: 6.17312719394982

Median Paternal Fraction: 7.5842696629213435

IQR Paternal Fraction: 7.5842696629213435

Mean Fetal Fraction: 12.34625438789964

Median Fetal Fraction: 15.168539325842687

IQR Fetal Fraction: 7.995736536196958

Total Count: 1765

Alternative Count: 913

Alternative Ratio: 0.5172804532577904

FL_SNPs Table

Chromosome Start End Num.reads A A_fraction G G_fraction C C_fraction T T_fraction ColMax PaternalFraction FetalFraction
chr9 2718464.0 2718465.0 1633.0 1609.0 98.530312 1.0 0.061237 21.0 1.285977 2.0 0.122474 98.530312 1.469688 2.939375
chr19 4569797.0 4569798.0 2039.0 1846.0 90.534576 0.0 0.000000 190.0 9.318293 3.0 0.147131 90.534576 9.465424 18.930848
chr19 4569880.0 4569881.0 1424.0 6.0 0.421348 1.0 0.070225 101.0 7.092697 1316.0 92.415730 92.415730 7.584270 15.168539

Graphs

SCIP259 SCIP Report

Report for the C allele

Summary Statistics

Mean Paternal Fraction: 6.17312719394982

Median Paternal Fraction: 7.5842696629213435

IQR Paternal Fraction: 7.5842696629213435

Mean Fetal Fraction: 12.34625438789964

Median Fetal Fraction: 15.168539325842687

IQR Fetal Fraction: 7.995736536196958

Total Count: 1796

Alternative Count: 685

Alternative Ratio: 0.3814031180400891

FL_SNPs Table

Chromosome Start End Num.reads A A_fraction G G_fraction C C_fraction T T_fraction ColMax PaternalFraction FetalFraction
chr9 2718464.0 2718465.0 1633.0 1609.0 98.530312 1.0 0.061237 21.0 1.285977 2.0 0.122474 98.530312 1.469688 2.939375
chr19 4569797.0 4569798.0 2039.0 1846.0 90.534576 0.0 0.000000 190.0 9.318293 3.0 0.147131 90.534576 9.465424 18.930848
chr19 4569880.0 4569881.0 1424.0 6.0 0.421348 1.0 0.070225 101.0 7.092697 1316.0 92.415730 92.415730 7.584270 15.168539

Graphs